Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (P56869)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P56869
- Type
- protein
- Length
- 1,252 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA985B6095a9a818c5b67148D3932856860A953Ef
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- P56869
- Pockets
- 14 · best druggability 0.76
Structure
1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1252 | 32% helix, 26% strand | P56869 |
Pockets
14 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1076 | 0.76 | 0.78 | 125 | empty |
| 2 | 691 | 0.73 | 0.80 | 80 | empty |
| 3 | 179 | 0.52 | 0.78 | 23 | empty |
| 4 | 77 | 0.52 | 0.85 | 25 | empty |
| 5 | 222 | 0.51 | 0.76 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56869
- Elsewhere: UniProt P56869 · AlphaFold DB P56869
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