Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q8MA12)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8MA12
- Type
- protein
- Length
- 1,070 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x91Dc148ab08c1AB493A2D909C4D467a056F6E73d
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q8MA12
- Pockets
- 15 · best druggability 0.74
Structure
1 distinct chain · 30% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1070 | 30% helix, 27% strand | Q8MA12 |
Pockets
15 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 640 | 0.74 | 0.81 | 65 | empty |
| 2 | 705 | 0.71 | 0.78 | 77 | empty |
| 3 | 56 | 0.66 | 0.95 | 20 | empty |
| 4 | 65 | 0.55 | 0.88 | 23 | empty |
| 5 | 190 | 0.48 | 0.76 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8MA12
- Elsewhere: UniProt Q8MA12 · AlphaFold DB Q8MA12
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