Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A1V8B2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1V8B2
- Type
- protein
- Length
- 1,368 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x83521d6190CB56C500b18eCA10512992858dB9DC
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A1V8B2
- Pockets
- 14 · best druggability 0.77
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1368 | 33% helix, 25% strand | A1V8B2 |
Pockets
14 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1118 | 0.77 | 0.79 | 87 | empty |
| 2 | 512 | 0.75 | 0.83 | 49 | empty |
| 3 | 532 | 0.70 | 0.79 | 48 | empty |
| 4 | 52 | 0.65 | 0.95 | 16 | empty |
| 5 | 275 | 0.53 | 0.76 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1V8B2
- Elsewhere: UniProt A1V8B2 · AlphaFold DB A1V8B2
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