Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B1JU14)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JU14
- Type
- protein
- Length
- 1,368 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B1JU14
- Pockets
- 11 · best druggability 0.76
Structure
1 distinct chain · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1368 | 33% helix, 24% strand | B1JU14 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1178 | 0.76 | 0.78 | 97 | empty |
| 2 | 587 | 0.74 | 0.81 | 53 | empty |
| 3 | 996 | 0.73 | 0.77 | 91 | empty |
| 4 | 257 | 0.55 | 0.77 | 33 | empty |
| 5 | 149 | 0.49 | 0.78 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JU14
- Elsewhere: UniProt B1JU14 · AlphaFold DB B1JU14
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