Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B8D8J6)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8D8J6
- Type
- protein
- Length
- 1,342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d1188D30c5f312851Bc3459adef3C74f39a2A61
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B8D8J6
- Pockets
- 12 · best druggability 0.79
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1342 | 33% helix, 25% strand | B8D8J6 |
Pockets
12 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1073 | 0.79 | 0.80 | 81 | empty |
| 2 | 500 | 0.69 | 0.80 | 57 | empty |
| 3 | 405 | 0.67 | 0.80 | 43 | empty |
| 4 | 471 | 0.63 | 0.76 | 63 | empty |
| 5 | 394 | 0.60 | 0.76 | 54 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8D8J6
- Elsewhere: UniProt B8D8J6 · AlphaFold DB B8D8J6
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