Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q89J74)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q89J74
- Type
- protein
- Length
- 1,372 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBb37fE2B3777b9cf6A94E8e4EF413FcB6B83A32E
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q89J74
- Pockets
- 20 · best druggability 0.81
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1372 | 33% helix, 25% strand | Q89J74 |
Pockets
20 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 840 | 0.81 | 0.83 | 74 | empty |
| 2 | 449 | 0.73 | 0.83 | 44 | empty |
| 3 | 631 | 0.70 | 0.78 | 41 | empty |
| 4 | 51 | 0.66 | 0.96 | 16 | empty |
| 5 | 203 | 0.63 | 0.83 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q89J74
- Elsewhere: UniProt Q89J74 · AlphaFold DB Q89J74
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