Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B7J1W1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7J1W1
- Type
- protein
- Length
- 1,155 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf2298d65dC15c5e1ecF92211b4bE0D59D1aD2aD7
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B7J1W1
- Pockets
- 14 · best druggability 0.74
Structure
1 distinct chain · 29% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1155 | 29% helix, 28% strand | B7J1W1 |
Pockets
14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 829 | 0.74 | 0.78 | 88 | empty |
| 2 | 746 | 0.72 | 0.78 | 66 | empty |
| 3 | 131 | 0.56 | 0.83 | 24 | empty |
| 4 | 74 | 0.53 | 0.86 | 25 | empty |
| 5 | 196 | 0.52 | 0.78 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7J1W1
- Elsewhere: UniProt B7J1W1 · AlphaFold DB B7J1W1
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