Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q06J17)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06J17
- Type
- protein
- Length
- 1,099 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q06J17
- Pockets
- 19 · best druggability 0.74
Structure
1 distinct chain · 29% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1099 | 29% helix, 25% strand | Q06J17 |
Pockets
19 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1034 | 0.74 | 0.77 | 96 | empty |
| 2 | 494 | 0.70 | 0.80 | 51 | empty |
| 3 | 110 | 0.67 | 0.90 | 24 | empty |
| 4 | 51 | 0.67 | 0.96 | 20 | empty |
| 5 | 73 | 0.57 | 0.88 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06J17
- Elsewhere: UniProt Q06J17 · AlphaFold DB Q06J17
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