Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B3DTE2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3DTE2
- Type
- protein
- Length
- 1,187 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B3DTE2
- Pockets
- 17 · best druggability 0.78
Structure
1 distinct chain · 29% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1187 | 29% helix, 26% strand | B3DTE2 |
Pockets
17 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1169 | 0.78 | 0.80 | 108 | empty |
| 2 | 544 | 0.70 | 0.79 | 58 | empty |
| 3 | 60 | 0.68 | 0.96 | 19 | empty |
| 4 | 409 | 0.65 | 0.79 | 40 | empty |
| 5 | 345 | 0.60 | 0.77 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3DTE2
- Elsewhere: UniProt B3DTE2 · AlphaFold DB B3DTE2
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