Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A9VP69)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9VP69
- Type
- protein
- Length
- 1,177 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xec36345797D5f8570EE6344bD8f385a362719E9C
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A9VP69
- Pockets
- 19 · best druggability 0.71
Structure
1 distinct chain · 28% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1177 | 28% helix, 28% strand | A9VP69 |
Pockets
19 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 668 | 0.71 | 0.78 | 55 | empty |
| 2 | 579 | 0.71 | 0.79 | 71 | empty |
| 3 | 59 | 0.68 | 0.96 | 17 | empty |
| 4 | 421 | 0.64 | 0.78 | 36 | empty |
| 5 | 207 | 0.53 | 0.78 | 32 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9VP69
- Elsewhere: UniProt A9VP69 · AlphaFold DB A9VP69
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