Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B9JDS1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B9JDS1
- Type
- protein
- Length
- 1,380 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B9JDS1
- Pockets
- 18 · best druggability 0.81
Structure
1 distinct chain · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1380 | 32% helix, 25% strand | B9JDS1 |
Pockets
18 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1089 | 0.81 | 0.82 | 94 | empty |
| 2 | 637 | 0.74 | 0.81 | 73 | empty |
| 3 | 562 | 0.71 | 0.80 | 47 | empty |
| 4 | 53 | 0.68 | 0.97 | 15 | empty |
| 5 | 387 | 0.67 | 0.80 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9JDS1
- Elsewhere: UniProt B9JDS1 · AlphaFold DB B9JDS1
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