Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta C-terminal section (Q1KVX5)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1KVX5
- Type
- protein
- Length
- 565 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9931aC92C1f19DC0Af842b9E513171F8C449e45a
- Molecule
- DNA-directed RNA polymerase subunit beta C-terminal section
- UniProt
- Q1KVX5
- Pockets
- 9 · best druggability 0.62
Structure
1 distinct chain · 21% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta C-terminal section | protein | 565 | 21% helix, 24% strand | Q1KVX5 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.62 | 0.94 | 16 | empty |
| 2 | 335 | 0.57 | 0.75 | 25 | empty |
| 3 | 350 | 0.56 | 0.75 | 36 | empty |
| 4 | 218 | 0.48 | 0.74 | 27 | empty |
| 5 | 221 | 0.47 | 0.74 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1KVX5
- Elsewhere: UniProt Q1KVX5 · AlphaFold DB Q1KVX5
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