Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5XEA9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5XEA9
- Type
- protein
- Length
- 312 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x301d5A363B42a0830e9c585148Cf4D91Fb385a2f
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q5XEA9
- Pockets
- 4 · best druggability 0.48
Structure
1 distinct chain · 30% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 312 | 30% helix, 34% strand | Q5XEA9 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 189 | 0.48 | 0.74 | 25 | empty |
| 2 | 76 | 0.36 | 0.77 | 17 | empty |
| 3 | 51 | 0.33 | 0.78 | 11 | empty |
| 4 | 52 | 0.27 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XEA9
- Elsewhere: UniProt Q5XEA9 · AlphaFold DB Q5XEA9
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