Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q8WHZ1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8WHZ1
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8Ac1aA4077A467522645F56E10B95075Bc398970
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q8WHZ1
- Pockets
- 4 · best druggability 0.42
Structure
1 distinct chain · 31% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 340 | 31% helix, 31% strand | Q8WHZ1 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 138 | 0.42 | 0.74 | 19 | empty |
| 2 | 69 | 0.40 | 0.80 | 16 | empty |
| 3 | 62 | 0.36 | 0.78 | 16 | empty |
| 4 | 83 | 0.35 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WHZ1
- Elsewhere: UniProt Q8WHZ1 · AlphaFold DB Q8WHZ1
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