Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha, chloroplastic (P60315)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P60315
- Type
- protein
- Length
- 450 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- DNA-directed RNA polymerase subunit alpha, chloroplastic
- UniProt
- P60315
- Pockets
- 5 · best druggability 0.41
Structure
1 distinct chain · 29% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha, chloroplastic | protein | 450 | 29% helix, 23% strand | P60315 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.41 | 0.82 | 21 | empty |
| 2 | 97 | 0.37 | 0.74 | 16 | empty |
| 3 | 89 | 0.36 | 0.76 | 20 | empty |
| 4 | 64 | 0.35 | 0.77 | 13 | empty |
| 5 | 54 | 0.30 | 0.75 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P60315
- Elsewhere: UniProt P60315 · AlphaFold DB P60315
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