Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q9BBN0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BBN0
- Type
- protein
- Length
- 341 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa2a8313a9ac1C6C2Fd647eb71D26A934AC647886
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q9BBN0
- Pockets
- 5 · best druggability 0.48
Structure
1 distinct chain · 29% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 341 | 29% helix, 29% strand | Q9BBN0 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.48 | 0.79 | 24 | empty |
| 2 | 58 | 0.38 | 0.80 | 17 | empty |
| 3 | 82 | 0.37 | 0.75 | 13 | empty |
| 4 | 73 | 0.36 | 0.77 | 18 | empty |
| 5 | 52 | 0.30 | 0.76 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BBN0
- Elsewhere: UniProt Q9BBN0 · AlphaFold DB Q9BBN0
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