Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (P93968)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P93968
- Type
- protein
- Length
- 339 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8DA3aeb7A75914AFC2aD05F3CB4ab24952F19911
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- P93968
- Pockets
- 7 · best druggability 0.61
Structure
1 distinct chain · 32% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 339 | 32% helix, 32% strand | P93968 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 204 | 0.61 | 0.81 | 24 | empty |
| 2 | 146 | 0.55 | 0.81 | 18 | empty |
| 3 | 50 | 0.49 | 0.87 | 20 | empty |
| 4 | 177 | 0.48 | 0.76 | 19 | empty |
| 5 | 119 | 0.40 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P93968
- Elsewhere: UniProt P93968 · AlphaFold DB P93968
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