Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q661B8)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q661B8
- Type
- protein
- Length
- 344 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x60204b619fC33576518c02b613d60382956C214A
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q661B8
- Pockets
- 4 · best druggability 0.46
Structure
1 distinct chain · 37% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 344 | 37% helix, 30% strand | Q661B8 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 63 | 0.46 | 0.83 | 20 | empty |
| 2 | 116 | 0.41 | 0.75 | 17 | empty |
| 3 | 53 | 0.31 | 0.75 | 10 | empty |
| 4 | 53 | 0.28 | 0.73 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q661B8
- Elsewhere: UniProt Q661B8 · AlphaFold DB Q661B8
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