Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q7GED9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7GED9
- Type
- protein
- Length
- 339 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3fcD6ed69FF1FF21E33994A31d5818AC9e3aDb33
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q7GED9
- Pockets
- 5 · best druggability 0.58
Structure
1 distinct chain · 31% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 339 | 31% helix, 32% strand | Q7GED9 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 206 | 0.58 | 0.80 | 26 | empty |
| 2 | 136 | 0.53 | 0.80 | 18 | empty |
| 3 | 201 | 0.52 | 0.77 | 19 | empty |
| 4 | 116 | 0.37 | 0.74 | 19 | empty |
| 5 | 65 | 0.35 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7GED9
- Elsewhere: UniProt Q7GED9 · AlphaFold DB Q7GED9
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