Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (B7GW27)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7GW27
- Type
- protein
- Length
- 335 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1356c5012d2a4B7147D097c2440ef76F9D0C0f34
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- B7GW27
- Pockets
- 5 · best druggability 0.48
Structure
1 distinct chain · 30% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 335 | 30% helix, 29% strand | B7GW27 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.48 | 0.77 | 23 | empty |
| 2 | 73 | 0.41 | 0.79 | 14 | empty |
| 3 | 101 | 0.39 | 0.76 | 14 | empty |
| 4 | 64 | 0.37 | 0.79 | 18 | empty |
| 5 | 53 | 0.28 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7GW27
- Elsewhere: UniProt B7GW27 · AlphaFold DB B7GW27
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