Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit B'' (O27123)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit B''… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O27123
- Type
- protein
- Length
- 519 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- DNA-directed RNA polymerase subunit B''
- UniProt
- O27123
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 44% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit B'' | protein | 519 | 44% helix, 20% strand | O27123 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 389 | 0.62 | 0.77 | 49 | empty |
| 2 | 173 | 0.49 | 0.77 | 25 | empty |
| 3 | 198 | 0.46 | 0.74 | 21 | empty |
| 4 | 56 | 0.33 | 0.77 | 15 | empty |
| 5 | 66 | 0.28 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O27123
- Elsewhere: UniProt O27123 · AlphaFold DB O27123
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