Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit B' (O28392)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit B'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O28392
- Type
- protein
- Length
- 604 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- DNA-directed RNA polymerase subunit B'
- UniProt
- O28392
- Pockets
- 5 · best druggability 0.43
Structure
1 distinct chain · 24% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit B' | protein | 604 | 24% helix, 29% strand | O28392 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 174 | 0.43 | 0.74 | 21 | empty |
| 2 | 150 | 0.42 | 0.74 | 22 | empty |
| 3 | 95 | 0.35 | 0.73 | 18 | empty |
| 4 | 63 | 0.32 | 0.76 | 18 | empty |
| 5 | 71 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O28392
- Elsewhere: UniProt O28392 · AlphaFold DB O28392
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