Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit a' (B0R8D4)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit a'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0R8D4
- Type
- protein
- Length
- 971 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- DNA-directed RNA polymerase subunit a'
- UniProt
- B0R8D4
- Pockets
- 8 · best druggability 0.49
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit a' | protein | 971 | 41% helix, 16% strand | B0R8D4 |
Pockets
8 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 96 | 0.49 | 0.82 | 19 | empty |
| 2 | 184 | 0.47 | 0.75 | 29 | empty |
| 3 | 163 | 0.41 | 0.73 | 22 | empty |
| 4 | 68 | 0.33 | 0.75 | 18 | empty |
| 5 | 85 | 0.32 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0R8D4
- Elsewhere: UniProt B0R8D4 · AlphaFold DB B0R8D4
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