Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit a'' (C3NFS2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit a''… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C3NFS2
- Type
- protein
- Length
- 392 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- DNA-directed RNA polymerase subunit a''
- UniProt
- C3NFS2
- Pockets
- 4 · best druggability 0.60
Structure
1 distinct chain · 46% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit a'' | protein | 392 | 46% helix, 14% strand | C3NFS2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 205 | 0.60 | 0.81 | 28 | empty |
| 2 | 129 | 0.41 | 0.74 | 22 | empty |
| 3 | 107 | 0.34 | 0.73 | 21 | empty |
| 4 | 55 | 0.26 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3NFS2
- Elsewhere: UniProt C3NFS2 · AlphaFold DB C3NFS2
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