Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit a'' (B0R8D3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit a''… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0R8D3
- Type
- protein
- Length
- 397 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe4aF75CC6301a0Afa5dD04dd207fC9F42D188805
- Molecule
- DNA-directed RNA polymerase subunit a''
- UniProt
- B0R8D3
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 48% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit a'' | protein | 397 | 48% helix, 13% strand | B0R8D3 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 404 | 0.62 | 0.77 | 48 | empty |
| 2 | 156 | 0.49 | 0.77 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0R8D3
- Elsewhere: UniProt B0R8D3 · AlphaFold DB B0R8D3
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