Research workbench
AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN8 (Q6FMD8)
Analyse AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN8… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6FMD8
- Type
- protein
- Length
- 329 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1870f7A7de043458b061e1a3A5431D8b56e790fE
- Molecule
- 26S proteasome regulatory subunit RPN8
- UniProt
- Q6FMD8
- Pockets
- 4 · best druggability 0.36
Structure
1 distinct chain · 52% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 26S proteasome regulatory subunit RPN8 | protein | 329 | 52% helix, 17% strand | Q6FMD8 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.36 | 0.79 | 15 | empty |
| 2 | 97 | 0.33 | 0.73 | 16 | empty |
| 3 | 73 | 0.33 | 0.74 | 16 | empty |
| 4 | 64 | 0.31 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6FMD8
- Elsewhere: UniProt Q6FMD8 · AlphaFold DB Q6FMD8
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