Research workbench
AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN1 (Q8SS65)
Analyse AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8SS65
- Type
- protein
- Length
- 795 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe33Eca57aeE4Ebe2c48b05dD1ffC9A854cfaCbe7
- Molecule
- 26S proteasome regulatory subunit RPN1
- UniProt
- Q8SS65
- Pockets
- 9 · best druggability 0.80
Structure
1 distinct chain · 62% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 26S proteasome regulatory subunit RPN1 | protein | 795 | 62% helix, 5% strand | Q8SS65 |
Pockets
9 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1036 | 0.80 | 0.82 | 99 | empty |
| 2 | 263 | 0.63 | 0.81 | 35 | empty |
| 3 | 94 | 0.47 | 0.81 | 22 | empty |
| 4 | 96 | 0.46 | 0.79 | 22 | empty |
| 5 | 79 | 0.42 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SS65
- Elsewhere: UniProt Q8SS65 · AlphaFold DB Q8SS65
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