Research workbench
AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN11 (P41878)
Analyse AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN11… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P41878
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- 26S proteasome regulatory subunit RPN11
- UniProt
- P41878
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 47% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 26S proteasome regulatory subunit RPN11 | protein | 308 | 47% helix, 21% strand | P41878 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 257 | 0.54 | 0.77 | 36 | empty |
| 2 | 155 | 0.44 | 0.75 | 25 | empty |
| 3 | 52 | 0.33 | 0.78 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P41878
- Elsewhere: UniProt P41878 · AlphaFold DB P41878
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