Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit RPC3 (Q5XIL3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5XIL3
- Type
- protein
- Length
- 533 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- DNA-directed RNA polymerase III subunit RPC3
- UniProt
- Q5XIL3
- Pockets
- 7 · best druggability 0.62
Structure
1 distinct chain · 61% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase III subunit RPC3 | protein | 533 | 61% helix, 10% strand | Q5XIL3 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.62 | 0.78 | 44 | empty |
| 2 | 67 | 0.37 | 0.78 | 13 | empty |
| 3 | 67 | 0.32 | 0.75 | 13 | empty |
| 4 | 88 | 0.31 | 0.73 | 19 | empty |
| 5 | 77 | 0.30 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XIL3
- Elsewhere: UniProt Q5XIL3 · AlphaFold DB Q5XIL3
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