Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit RPC1 (P08968)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P08968
- Type
- protein
- Length
- 1,530 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x01a12c15Eab6FFCFA8a2083d486B834c1B47E8c8
- Molecule
- DNA-directed RNA polymerase III subunit RPC1
- UniProt
- P08968
- Pockets
- 20 · best druggability 0.71
Structure
1 distinct chain · 44% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase III subunit RPC1 | protein | 1530 | 44% helix, 12% strand | P08968 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1173 | 0.71 | 0.75 | 88 | empty |
| 2 | 582 | 0.70 | 0.78 | 77 | empty |
| 3 | 507 | 0.69 | 0.79 | 38 | empty |
| 4 | 607 | 0.65 | 0.76 | 59 | empty |
| 5 | 584 | 0.61 | 0.74 | 39 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08968
- Elsewhere: UniProt P08968 · AlphaFold DB P08968
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