Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit RPC1 (Q6BI69)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6BI69
- Type
- protein
- Length
- 1,457 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- DNA-directed RNA polymerase III subunit RPC1
- UniProt
- Q6BI69
- Pockets
- 20 · best druggability 0.71
Structure
1 distinct chain · 45% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase III subunit RPC1 | protein | 1457 | 45% helix, 14% strand | Q6BI69 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1125 | 0.71 | 0.75 | 85 | empty |
| 2 | 508 | 0.69 | 0.78 | 38 | empty |
| 3 | 380 | 0.64 | 0.78 | 44 | empty |
| 4 | 243 | 0.57 | 0.79 | 32 | empty |
| 5 | 386 | 0.55 | 0.74 | 44 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6BI69
- Elsewhere: UniProt Q6BI69 · AlphaFold DB Q6BI69
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