Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase II-associated protein 3 (Q9D706)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase II-associated protein 3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9D706
- Type
- protein
- Length
- 660 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- RNA polymerase II-associated protein 3
- UniProt
- Q9D706
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase II-associated protein 3 | protein | 660 | 55% helix, 0% strand | Q9D706 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 437 | 0.65 | 0.78 | 39 | empty |
| 2 | 60 | 0.34 | 0.77 | 11 | empty |
| 3 | 50 | 0.29 | 0.75 | 16 | empty |
| 4 | 64 | 0.27 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9D706
- Elsewhere: UniProt Q9D706 · AlphaFold DB Q9D706
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