Research workbench
AlphaFold monomer V2.0 prediction for putative RNA polymerase II subunit B1 ctd phosphatase RTR1 (O42853)
Analyse AlphaFold monomer V2.0 prediction for putative RNA polymerase II subunit B1 ctd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O42853
- Type
- protein
- Length
- 197 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Putative RNA polymerase II subunit B1 ctd phosphatase RTR1
- UniProt
- O42853
- Pockets
- 2 · best druggability 0.41
Structure
1 distinct chain · 57% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative RNA polymerase II subunit B1 ctd phosphatase RTR1 | protein | 197 | 57% helix, 5% strand | O42853 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 135 | 0.41 | 0.74 | 17 | empty |
| 2 | 50 | 0.29 | 0.75 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O42853
- Elsewhere: UniProt O42853 · AlphaFold DB O42853
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