Research workbench
AlphaFold monomer V2.0 prediction for putative DNA-directed RNA polymerase subunit alpha-like 3 (Q06FN6)
Analyse AlphaFold monomer V2.0 prediction for putative DNA-directed RNA polymerase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06FN6
- Type
- protein
- Length
- 365 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4bACC5add46fe6bCd6b331cB1a7ff48282231c72
- Molecule
- Putative DNA-directed RNA polymerase subunit alpha-like 3
- UniProt
- Q06FN6
- Pockets
- 5 · best druggability 0.56
Structure
1 distinct chain · 27% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative DNA-directed RNA polymerase subunit alpha-like 3 | protein | 365 | 27% helix, 39% strand | Q06FN6 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 305 | 0.56 | 0.76 | 46 | empty |
| 2 | 99 | 0.40 | 0.77 | 21 | empty |
| 3 | 90 | 0.36 | 0.75 | 19 | empty |
| 4 | 78 | 0.32 | 0.74 | 13 | empty |
| 5 | 69 | 0.29 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06FN6
- Elsewhere: UniProt Q06FN6 · AlphaFold DB Q06FN6
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