Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases I and III subunit RPAC1 (Q54SN4)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases I and III… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54SN4
- Type
- protein
- Length
- 345 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xacc788661A6cCdc9C3614839e76D49650AA38552
- Molecule
- DNA-directed RNA polymerases I and III subunit RPAC1
- UniProt
- Q54SN4
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 30% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerases I and III subunit RPAC1 | protein | 345 | 30% helix, 31% strand | Q54SN4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 325 | 0.64 | 0.80 | 36 | empty |
| 2 | 122 | 0.41 | 0.76 | 27 | empty |
| 3 | 54 | 0.31 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54SN4
- Elsewhere: UniProt Q54SN4 · AlphaFold DB Q54SN4
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