Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase I subunit RPA49 (Q8K202)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase I subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8K202
- Type
- protein
- Length
- 482 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC8EC2E6D757E959bb64e7BAd42bEe5eFaAd0809D
- Molecule
- DNA-directed RNA polymerase I subunit RPA49
- UniProt
- Q8K202
- Pockets
- 7 · best druggability 0.60
Structure
1 distinct chain · 38% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase I subunit RPA49 | protein | 482 | 38% helix, 17% strand | Q8K202 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 416 | 0.60 | 0.76 | 58 | empty |
| 2 | 440 | 0.59 | 0.75 | 59 | empty |
| 3 | 101 | 0.47 | 0.80 | 17 | empty |
| 4 | 84 | 0.36 | 0.76 | 19 | empty |
| 5 | 55 | 0.30 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8K202
- Elsewhere: UniProt Q8K202 · AlphaFold DB Q8K202
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