Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor (P77998)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor (P77998) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P77998
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- RNA polymerase sigma-54 factor
- UniProt
- P77998
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 51% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma-54 factor | protein | 479 | 51% helix, 7% strand | P77998 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.48 | 0.83 | 19 | empty |
| 2 | 84 | 0.33 | 0.74 | 18 | empty |
| 3 | 50 | 0.28 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P77998
- Elsewhere: UniProt P77998 · AlphaFold DB P77998
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