Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor (P49989)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor (P49989) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P49989
- Type
- protein
- Length
- 520 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdE0734Aa6a66F7c5d25eE07fcCDE0b35ea4ccc4b
- Molecule
- RNA polymerase sigma-54 factor
- UniProt
- P49989
- Pockets
- 1 · best druggability 0.39
Structure
1 distinct chain · 49% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma-54 factor | protein | 520 | 49% helix, 6% strand | P49989 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 116 | 0.39 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49989
- Elsewhere: UniProt P49989 · AlphaFold DB P49989
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