Research workbench
AlphaFold monomer V2.0 prediction for protein rogdi homolog (Q4V7D2)
Analyse AlphaFold monomer V2.0 prediction for protein rogdi homolog (Q4V7D2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4V7D2
- Type
- protein
- Length
- 287 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9aD208242de9c7C25e2FbA3404A2bA0A5f6c2Eac
- Molecule
- Protein rogdi homolog
- UniProt
- Q4V7D2
- Pockets
- 3 · best druggability 0.41
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein rogdi homolog | protein | 287 | 42% helix, 25% strand | Q4V7D2 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.41 | 0.77 | 20 | empty |
| 2 | 55 | 0.29 | 0.75 | 11 | empty |
| 3 | 50 | 0.28 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4V7D2
- Elsewhere: UniProt Q4V7D2 · AlphaFold DB Q4V7D2
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