Research workbench
AlphaFold monomer V2.0 prediction for peptidoglycan glycosyltransferase roda (Q50186)
Analyse AlphaFold monomer V2.0 prediction for peptidoglycan glycosyltransferase roda… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q50186
- Type
- protein
- Length
- 465 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x21A838E724C11C58120a2D0eF006493f27ab46F2
- Molecule
- Peptidoglycan glycosyltransferase roda
- UniProt
- Q50186
- Pockets
- 7 · best druggability 0.65
Structure
1 distinct chain · 66% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidoglycan glycosyltransferase roda | protein | 465 | 66% helix, 3% strand | Q50186 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 257 | 0.65 | 0.82 | 24 | empty |
| 2 | 502 | 0.64 | 0.77 | 52 | empty |
| 3 | 132 | 0.41 | 0.74 | 17 | empty |
| 4 | 67 | 0.32 | 0.75 | 13 | empty |
| 5 | 72 | 0.30 | 0.72 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q50186
- Elsewhere: UniProt Q50186 · AlphaFold DB Q50186
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