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AlphaFold monomer V2.0 prediction for ribonuclease J (P9WGZ9)

Analyse AlphaFold monomer V2.0 prediction for ribonuclease J (P9WGZ9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P9WGZ9
Type: protein
Length: 558 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
Molecule: Ribonuclease J
UniProt: P9WGZ9
Pockets: 2 · best druggability 0.75

Structure

1 distinct chain · 33% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribonuclease J	protein	558	33% helix, 25% strand	P9WGZ9

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	801	0.75	0.80	86	empty
2	81	0.33	0.74	18	empty

Compared structures

7WNU · Mycobacterium tuberculosis Rnase J complex with 7nt RNA · an experimental structure of the same protein · chain A against A, TM-score 0.96
7WNT · RNase J from Mycobacterium tuberculosis · an experimental structure of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P9WGZ9
Elsewhere: UniProt P9WGZ9 · AlphaFold DB P9WGZ9

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