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AlphaFold monomer V2.0 prediction for ribonuclease J 2 (Q8CST0)

Analyse AlphaFold monomer V2.0 prediction for ribonuclease J 2 (Q8CST0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q8CST0
Type: protein
Length: 557 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xBCbF010796f43F87eb3a18895Cb522A7404eFA25
Molecule: Ribonuclease J 2
UniProt: Q8CST0
Pockets: 4 · best druggability 0.78

Structure

1 distinct chain · 36% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribonuclease J 2	protein	557	36% helix, 25% strand	Q8CST0

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	838	0.78	0.81	71	empty
2	172	0.52	0.79	26	empty
3	102	0.38	0.75	18	empty
4	75	0.37	0.77	15	empty

Compared structures

6K6W · Structure of RNase J2 from Staphylococcus epidermidis · an experimental structure of the same protein · chain A against A, TM-score 0.78
6K6W · Structure of RNase J2 from staphylococcus epidermidis · an experimental structure of the same protein · chain A against A, TM-score 0.78

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8CST0
Elsewhere: UniProt Q8CST0 · AlphaFold DB Q8CST0

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