Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNFT1 (Q6NTV1)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNFT1 (Q6NTV1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6NTV1
- Type
- protein
- Length
- 416 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC9A0eDbf07927787716Cb7a1ddF76f76a79b2f92
- Molecule
- E3 ubiquitin-protein ligase RNFT1
- UniProt
- Q6NTV1
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 50% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase RNFT1 | protein | 416 | 50% helix, 3% strand | Q6NTV1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 136 | 0.67 | 0.88 | 30 | empty |
| 2 | 174 | 0.48 | 0.76 | 21 | empty |
| 3 | 65 | 0.38 | 0.79 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6NTV1
- Elsewhere: UniProt Q6NTV1 · AlphaFold DB Q6NTV1
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