Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNFT1 (Q5M7Z0)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNFT1 (Q5M7Z0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5M7Z0
- Type
- protein
- Length
- 435 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- E3 ubiquitin-protein ligase RNFT1
- UniProt
- Q5M7Z0
- Pockets
- 5 · best druggability 0.56
Structure
1 distinct chain · 49% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase RNFT1 | protein | 435 | 49% helix, 3% strand | Q5M7Z0 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 188 | 0.56 | 0.80 | 30 | empty |
| 2 | 219 | 0.54 | 0.77 | 26 | empty |
| 3 | 133 | 0.42 | 0.75 | 19 | empty |
| 4 | 55 | 0.31 | 0.76 | 10 | empty |
| 5 | 52 | 0.27 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5M7Z0
- Elsewhere: UniProt Q5M7Z0 · AlphaFold DB Q5M7Z0
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