Research workbench
AlphaFold monomer V2.0 prediction for ion-translocating oxidoreductase complex subunit E (Q9F5Y1)
Analyse AlphaFold monomer V2.0 prediction for ion-translocating oxidoreductase complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9F5Y1
- Type
- protein
- Length
- 238 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
- Molecule
- Ion-translocating oxidoreductase complex subunit E
- UniProt
- Q9F5Y1
- Pockets
- 2 · best druggability 0.52
Structure
1 distinct chain · 76% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ion-translocating oxidoreductase complex subunit E | protein | 238 | 76% helix, 2% strand | Q9F5Y1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 184 | 0.52 | 0.78 | 23 | empty |
| 2 | 69 | 0.38 | 0.77 | 17 | empty |
Compared structures
- 8RBQ · Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii… · an experimental structure of the same protein · chain A against E, TM-score 0.85
- 8AHX · Cryo-EM structure of the nitrogen-fixation associated NADH:ferredoxin oxidoreductase RNF… · an experimental structure of the same protein · chain A against E, TM-score 0.85
- 8RB8 · Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii… · an experimental structure of the same protein · chain A against E, TM-score 0.85
- 8RB9 · Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii… · an experimental structure of the same protein · chain A against E, TM-score 0.85
- 8RBM · Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii… · an experimental structure of the same protein · chain A against E, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9F5Y1
- Elsewhere: UniProt Q9F5Y1 · AlphaFold DB Q9F5Y1
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