Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF6 (Q9DBU5)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF6 (Q9DBU5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9DBU5
- Type
- protein
- Length
- 667 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- E3 ubiquitin-protein ligase RNF6
- UniProt
- Q9DBU5
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 18% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase RNF6 | protein | 667 | 18% helix, 9% strand | Q9DBU5 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 433 | 0.71 | 0.81 | 42 | empty |
| 2 | 405 | 0.67 | 0.79 | 46 | empty |
| 3 | 173 | 0.63 | 0.84 | 26 | empty |
| 4 | 194 | 0.46 | 0.75 | 25 | empty |
| 5 | 137 | 0.43 | 0.76 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9DBU5
- Elsewhere: UniProt Q9DBU5 · AlphaFold DB Q9DBU5
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