Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase rlim (Q9WTV7)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase rlim (Q9WTV7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9WTV7
- Type
- protein
- Length
- 600 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- E3 ubiquitin-protein ligase rlim
- UniProt
- Q9WTV7
- Pockets
- 3 · best druggability 0.77
Structure
1 distinct chain · 20% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase rlim | protein | 600 | 20% helix, 12% strand | Q9WTV7 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 835 | 0.77 | 0.80 | 68 | empty |
| 2 | 565 | 0.68 | 0.78 | 64 | empty |
| 3 | 106 | 0.43 | 0.78 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WTV7
- Elsewhere: UniProt Q9WTV7 · AlphaFold DB Q9WTV7
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