Research workbench
AlphaFold monomer V2.0 prediction for exoribonuclease 2 (C6DK05)
Analyse AlphaFold monomer V2.0 prediction for exoribonuclease 2 (C6DK05) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C6DK05
- Type
- protein
- Length
- 644 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa45dD35927152C5962CFe12358A1c343B89E684F
- Molecule
- Exoribonuclease 2
- UniProt
- C6DK05
- Pockets
- 8 · best druggability 0.73
Structure
1 distinct chain · 30% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exoribonuclease 2 | protein | 644 | 30% helix, 32% strand | C6DK05 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 880 | 0.73 | 0.77 | 66 | empty |
| 2 | 150 | 0.53 | 0.80 | 23 | empty |
| 3 | 277 | 0.51 | 0.74 | 32 | empty |
| 4 | 141 | 0.51 | 0.80 | 21 | empty |
| 5 | 230 | 0.50 | 0.75 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6DK05
- Elsewhere: UniProt C6DK05 · AlphaFold DB C6DK05
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