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AlphaFold monomer V2.0 prediction for ribosomal protein S5, mitochondrial (P23351)

Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S5, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P23351
Type: protein
Length: 508 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
Molecule: Ribosomal protein S5, mitochondrial
UniProt: P23351
Pockets: 6 · best druggability 0.68

Structure

1 distinct chain · 40% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribosomal protein S5, mitochondrial	protein	508	40% helix, 14% strand	P23351

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	570	0.68	0.78	43	empty
2	159	0.60	0.83	30	empty
3	138	0.50	0.79	25	empty
4	92	0.42	0.78	16	empty
5	83	0.42	0.79	18	empty

Compared structures

6YW5 · The structure of the small subunit of the mitoribosome from Neurospora crassa · an experimental structure of the same protein · chain A against CC, TM-score 0.60
6YWX · The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site · an experimental structure of the same protein · chain A against CC, TM-score 0.60

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P23351
Elsewhere: UniProt P23351 · AlphaFold DB P23351

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