Research workbench
AlphaFold monomer V2.0 prediction for copalyl diphosphate synthase (A0A0H5BB17)
Analyse AlphaFold monomer V2.0 prediction for copalyl diphosphate synthase (A0A0H5BB17) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0A0H5BB17
- Type
- protein
- Length
- 549 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Copalyl diphosphate synthase
- Pockets
- 6 · best druggability 0.81
Structure
1 distinct chain · 57% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Copalyl diphosphate synthase | protein | 549 | 57% helix, 3% strand | — |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 544 | 0.81 | 0.87 | 46 | empty |
| 2 | 127 | 0.52 | 0.81 | 23 | empty |
| 3 | 69 | 0.51 | 0.86 | 24 | empty |
| 4 | 176 | 0.48 | 0.77 | 27 | empty |
| 5 | 111 | 0.38 | 0.75 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
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